FAMT-package            Factor Analysis for Multiple Testing (FAMT) :
                        simultaneous tests under dependence in
                        high-dimensional data
annotations             Gene annotations data frame
as.FAMTdata             Create a 'FAMTdata' object from an expression,
                        covariates and annotations dataset
covariates              Covariates data frame
defacto                 FAMT factors description
emfa                    Factor Analysis model adjustment with the EM
                        algorithm
expression              Gene expressions data frame
modelFAMT               The FAMT complete multiple testing procedure
nbfactors               Estimation of the optimal number of factors of
                        the FA model
pi0FAMT                 Estimation of the Proportion of True Null
                        Hypotheses
raw.pvalues             Calculation of classical multiple testing
                        statistics and p-values
residualsFAMT           Calculation of residual under null hypothesis
summaryFAMT             Summary of a FAMTdata or a FAMTmodel
