emptySampleSet          Generate an empty RTMS sample set
exampleSpectrum         Simple Example Spectrum
getBrukerBAFAllMetadata
                        Retrieve all metadata values from a Bruker BAF
                        file
getBrukerBAFMetadata    Retrieve specific metadata values from a Bruker
                        BAF file
getBrukerMCFAllMetadata
                        Retrieve all metadata values from a Bruker MCF
                        file
getBrukerMCFIntensities
                        Retrieve peak intensities directly from an MCF
                        file
getBrukerMCFMetadata    Retrieve specific metadata values from a Bruker
                        BAF file
getBrukerMCFSpots       Get spot names and indices from a Bruker MCF
                        file
getSample               Get an RTMS Sample
getSample.rtmsBrukerBAFReader
                        Extract a sample from a Bruker BAF directory
getSample.rtmsBrukerMCFReader
                        Extract a sample from a Bruker MCF directory
getSample.rtmsSpectrum
                        Extract a sample from an RTMS spectrum object
getSampleSet            Get an RTMS Sample Set
getSampleSet.rtmsBrukerMCFReader
                        Extract a sample set from a Bruker MCF
                        directory
getSpectrum             Get an RTMS Spectrum
getSpectrum.rtmsBrukerBAFReader
                        Extract a spectrum from a Bruker BAF directory
getSpectrum.rtmsBrukerMCFReader
                        Extract a spectrum from a Bruker MCF directory
measureSample           Measure peaks in an RTMS sample
measureSampleSet        Measure peaks and samples in an RTMS sample set
newBrukerBAFReader      Open a Bruker single-acquisition BAF directory
newBrukerMCFReader      Open a Bruker multi-acquisition MCF directory
plotRtmsSample          Plot an RTMS sample object
plotRtmsSampleSet       Plot an RTMS sample set object
plotRtmsSpectrum        Plot an RTMS spectrum object
reopen                  Reopen a reader object
reopen.rtmsBrukerMCFReader
                        Manage an MCF reader file connection
rtmsPeak                Create an RTMS m/z Peak Object
rtmsPeakList            Create a list of RTMS m/z peak objects
rtmsSpectrum            Create a new RTMS spectrum
sampleAndSampleSet      Functions for creating and manipulating samples
                        and sample sets
