2069da0723fe640870f3f938ae290263 *DESCRIPTION
f376808645582ec91371509fd8ed9329 *NAMESPACE
04a387fe73f5f21ec1de673520733f47 *R/AP_assay_simulator.R
4ac7b72fd6afd2810dc1fa77304533da *R/AP_insect_simulator.R
ad68025da14b1aadcf9a30a391bc0fe4 *R/EpiPvr-package.R
83afa7a773b10865338aca66e4a082a1 *R/calculate_epidemic_probability.R
90d660b69774b6001439e2076c833bd6 *R/data.R
83d19e2c54cdd037a1c87a9405e19064 *R/estimate_virus_parameters_PT.R
d9a06fe0f0c4b21dc6f8e113d8a140af *R/estimate_virus_parameters_SPT.R
d8abdde71d4813d349cbbd7a9bc8bd43 *R/inoc_durtn_calculator.R
3b7a823214b9c6d33181b7bbd0fb1d64 *R/solveInoculumStatesBP.R
34c424f4167cdf299866d4e363cccad9 *R/stanmodels.R
1dda19015f0aa969acee990c150e3ac9 *build/partial.rdb
74fb66a0b2aa6596cbf19b7b9f9b604b *build/vignette.rds
95009083c3fb85cce427eb47a3812044 *configure
324403dc39f6a11358ab2674a63ebfd0 *configure.win
d2997da8ec94c9c41d4846bec3bead3c *data/ap_data_sim_PT.rda
446cde8bdd1a7d7f96a1b040508c43eb *data/ap_data_sim_SPT.rda
db809552304159af9fbbde2b84b682a7 *inst/CITATION
0ab021f6dc3bdc1ec4141c597bd6bde2 *inst/WORDLIST
ff02d912522220e47839371758918a68 *inst/doc/EpiPV_analysis_script.R
960f487e0926dd9b8cf552fe9c1d7e36 *inst/doc/EpiPV_analysis_script.Rmd
c1b5d9fa48557f6c90a9bb65059620db *inst/doc/EpiPV_analysis_script.html
347e9916ef981bfb78f2bb8702f37802 *inst/doc/assay_simulation_script.R
6581a810e4318f2fb43587203138ee7c *inst/doc/assay_simulation_script.Rmd
37725d8cccce37c8684195fd41b8cacd *inst/doc/assay_simulation_script.html
eec73b3d2c8363f20f04d0541695b512 *inst/extdata/EVPT_sim.rds
4cfa731c1fdfe0bf4060a5b5662c817d *inst/extdata/EVSPT_sim.rds
f108f3911460247aacbcfdc2c6bf0b2c *inst/extdata/estimate_data_test_PT.rda
d079092f7ead60255d7c53f86ceae936 *inst/extdata/estimate_data_test_SPT.rda
98d6e236a1cb34f268f42aa3f0e60241 *inst/extdata/result_vec_byIns.rds
b7aeee52554b43e8ae37a1184ec3b6b5 *inst/extdata/result_vec_byIns_PT.rds
83ffd3f5b95df252953d1e416f859e0f *inst/extdata/result_vec_byPl.rds
497ba614494dad574710138aada0acdb *inst/extdata/result_vec_byPl_PT.rds
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
802b90dd5d71aef178be4e8ab7cbf07a *inst/stan/APmodel_PT_virus.stan
a31028e5a366509c0878b28a3d9de809 *inst/stan/APmodel_SPT_virus.stan
f5de312449c1911cb031ebc69801db89 *inst/stan/include/license.stan
3596ab4104c1b4bd7595a4773157f9e4 *man/AP_assay_simulator.Rd
a9dc763890cfa9d108f44f6410af95b4 *man/AP_insect_simulator.Rd
303decfa732f3ca68f765042f724efd5 *man/EpiPvr-package.Rd
4e472f9aa78abd8f802ade1a8ea71a8a *man/ap_data_sim_PT.Rd
21d2dd58860ed1df3f4eb12308ca8c20 *man/ap_data_sim_SPT.Rd
9d02ee0aa18600407790923b4ead9a34 *man/calculate_epidemic_probability.Rd
915e255656e832ee7cd62b3b39d3dd5b *man/estimate_virus_parameters_PT.Rd
a3d9fdb1575003089ba180375f75058f *man/estimate_virus_parameters_SPT.Rd
1d5dafb99650bd724030d8d3fd84b7e7 *man/gen_exp.Rd
88e2af8faa15dbef3c5e5f3b1658b289 *man/inoc_durtn_calculator.Rd
92c5bd12c1f9cc718b51ff2027f48384 *man/solveInoculumStatesBP.Rd
1a644ff673063787f68a6969a1e7548c *src/Makevars
caf4cfa219cdc678546e983f706908a4 *src/Makevars.win
50213e42121006d76c5b70b915f315f0 *src/RcppExports.cpp
22928b32df7c91a0078b90c1e042832d *src/stanExports_APmodel_PT_virus.cc
2e34c04f2541611402af0bf0e049bba9 *src/stanExports_APmodel_PT_virus.h
99afa8c2fe818b44d8bad9b3c9fb7932 *src/stanExports_APmodel_SPT_virus.cc
d5d3e9abcbb6f7e48c82b0eeaf9fbb8d *src/stanExports_APmodel_SPT_virus.h
0c69b930820421c8dfc96a2e735c1088 *tests/testthat.r
79e2ffb213b71444c1eeb6b30b63c48a *tests/testthat/test-ap_assay_simulator.r
9319021f445899624bdbe33ce30ebf83 *tests/testthat/test-calculate_epidemic_probability.r
fdb82ae400cd168940e469563616fad4 *tests/testthat/test-dataset_loading.r
295c37e08892b8d2eac4ad1359a3aab1 *tests/testthat/test-estimate_virus_parameters_PT.r
e644ac9b739e0ae1521b29183b1d8660 *tests/testthat/test-estimate_virus_parameters_SPT.r
759c75da5346f618256fb949612791cc *tests/testthat/test-helpers.r
960f487e0926dd9b8cf552fe9c1d7e36 *vignettes/EpiPV_analysis_script.Rmd
6581a810e4318f2fb43587203138ee7c *vignettes/assay_simulation_script.Rmd
