Last updated on 2025-11-03 03:49:41 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.4.2 | 12.74 | 156.52 | 169.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.4.2 | 8.74 | 102.93 | 111.67 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.4.2 | 45.00 | 218.45 | 263.45 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 2.4.2 | 44.00 | 231.77 | 275.77 | OK | |
| r-devel-windows-x86_64 | 2.4.2 | 20.00 | 166.00 | 186.00 | OK | |
| r-patched-linux-x86_64 | 2.4.2 | 12.37 | 144.65 | 157.02 | OK | |
| r-release-linux-x86_64 | 2.4.2 | 0.33 | 1.93 | 2.26 | ERROR | |
| r-release-macos-arm64 | 2.4.2 | 5.00 | 67.00 | 72.00 | OK | |
| r-release-macos-x86_64 | 2.4.2 | 18.00 | 257.00 | 275.00 | OK | |
| r-release-windows-x86_64 | 2.4.2 | 14.00 | 162.00 | 176.00 | OK | |
| r-oldrel-macos-arm64 | 2.4.2 | 5.00 | 74.00 | 79.00 | OK | |
| r-oldrel-macos-x86_64 | 2.4.2 | 21.00 | 252.00 | 273.00 | OK | |
| r-oldrel-windows-x86_64 | 2.4.2 | 22.00 | 214.00 | 236.00 | OK |
Version: 2.4.2
Check: R code for possible problems
Result: NOTE
fortify.fbdrange: no visible global function definition for
‘adjust_hclust_tip.edge.len’
Undefined global functions or variables:
adjust_hclust_tip.edge.len
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang
Version: 2.4.2
Check: examples
Result: ERROR
Running examples in ‘FossilSim-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.fbdrange
> ### Title: Plot oriented tree with stratigraphic ranges
> ### Aliases: plot.fbdrange
>
> ### ** Examples
>
> tree_file <- system.file("extdata", "fbdrange.trees", package = "FossilSim")
> fbdr <- get_fbdrange_from_file(tree_file)
> p <- plot(fbdr, smart.labels = TRUE)
Error in adjust_hclust_tip.edge.len(res, x) :
could not find function "adjust_hclust_tip.edge.len"
Calls: plot ... <Anonymous> -> ggplot.default -> fortify -> fortify.fbdrange
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.4.2
Check: examples
Result: ERROR
Running examples in ‘FossilSim-Ex.R’ failed
The error most likely occurred in:
> ### Name: plot.fbdrange
> ### Title: Plot oriented tree with stratigraphic ranges
> ### Aliases: plot.fbdrange
>
> ### ** Examples
>
> tree_file <- system.file("extdata", "fbdrange.trees", package = "FossilSim")
> fbdr <- get_fbdrange_from_file(tree_file)
> p <- plot(fbdr, smart.labels = TRUE)
Error in adjust_hclust_tip.edge.len(res, x) :
could not find function "adjust_hclust_tip.edge.len"
Calls: plot ... <Anonymous> -> ggplot.default -> fortify -> fortify.fbdrange
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.4.2
Check: package dependencies
Result: ERROR
Package required but not available: ‘ggtree’
Package suggested but not available for checking: ‘treeio’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-release-linux-x86_64