| AbsorbEvidence | Absorb evidence into the model |
| bn_to_graphNEL | Convert a bn object to graphNEL object |
| chest | A simulated data from the Chest Clinic example |
| ClusterTree-class | An S4 class of the cluster tree. |
| ClusterTreeCompile | Compile the cluster tree |
| ComputeKLDs | Compute signed and symmetric Kullback-Leibler divergence |
| ElimTreeInitialize | Initialize the elimination tree |
| emission | A ClusterTree Example of Emission Model |
| emission1000 | A simulated data from the Emission example |
| FactorQuery | Queries of discrete variable distributions |
| GetValue | Possible values of a discrete variable |
| Initializer | Initialize a ClusterTree object |
| liver | Mus Musculus HDL QTL data from Leduc et. al. (2012) |
| LocalModelCompile | Model compilation |
| Marginals | Obtain marginal distributions |
| PlotCGBN | Plot the Bayesian network |
| PlotMarginals | Plot the marginal distributions |
| PlotTree | Plot the cluster tree |
| Propagate | Propagate the cluster tree |
| qtlnet_to_graphNEL | Convert qtlnet to graphNEL object |
| runBayesNetApp | Launch the BayesNetBP Shiny App |
| Sampler | Sampling from the Bayesian network |
| SummaryMarginals | Summary a continuous marginal distribution |
| toytree | A ClusterTree Example of Liver Model |
| yeast | Saccharomyces Cerevisiae eQTL data from Kruglak et. al. (2005) |