A Brain Imaging Data Structure ('BIDS') Parser

---

Documentation for package ‘bidsr’ version 0.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

as_bids_tabular	Class definitions and utilities for 'BIDS' tabular
BIDSClassBase	Low-level abstract class for 'bidsr'
BIDSDatasetDescription	Class definition of 'BIDS' data-set description
BIDSDatasetGeneratedBy	Class definition for 'BIDS' meta-data "GeneratedBy"
BIDSEntity	Class definitions of 'BIDS' entity
BIDSEntity_any_optional	Class definitions of 'BIDS' entity
BIDSEntity_any_prohibited	Class definitions of 'BIDS' entity
BIDSEntity_any_required	Class definitions of 'BIDS' entity
BIDSEntity_index_optional	Class definitions of 'BIDS' entity
BIDSEntity_index_prohibited	Class definitions of 'BIDS' entity
BIDSEntity_index_required	Class definitions of 'BIDS' entity
BIDSEntity_label_optional	Class definitions of 'BIDS' entity
BIDSEntity_label_prohibited	Class definitions of 'BIDS' entity
BIDSEntity_label_required	Class definitions of 'BIDS' entity
BIDSMap	Low-level nested map to store key-value data with inherited structure
BIDSProject	'BIDS' project class
BIDSSubject	'BIDS' subject class
BIDSTabular	Class definitions and utilities for 'BIDS' tabular
BIDSTabularColumnDescriptor	Class definitions and utilities for 'BIDS' tabular
BIDSTabularMetaSidecar	Class definitions and utilities for 'BIDS' tabular
BIDSTabularParticipants	'BIDS' participant table class
BIDSTabularPhenotype	'BIDS' phenotype and assessment table class
BIDSTabularSamples	'BIDS' samples table class
BIDSTabularScans	'BIDS' scans table class
BIDSTabularSessions	'BIDS' sessions table class
BIDSURI	'BIDS' uniform resource indicator ('URI') class definition
bids_project	'BIDS' project class
bids_property	"S7" property for 'BIDS' classes
bids_property_character	"S7" property for 'BIDS' classes
bids_property_choice	"S7" property for 'BIDS' classes
bids_property_collapsed_character	"S7" property for 'BIDS' classes
bids_property_data_frame	"S7" property for 'BIDS' classes
bids_property_deprecated	"S7" property for 'BIDS' classes
bids_property_entity_list	"S7" property for 'BIDS' classes
bids_property_integerish	"S7" property for 'BIDS' classes
bids_property_list	"S7" property for 'BIDS' classes
bids_property_named_list	"S7" property for 'BIDS' classes
bids_property_numeric	"S7" property for 'BIDS' classes
bids_property_optional	"S7" property for 'BIDS' classes
bids_property_prohibited	"S7" property for 'BIDS' classes
bids_property_recommended	"S7" property for 'BIDS' classes
bids_property_required	"S7" property for 'BIDS' classes
bids_property_tabular_column_descriptor_list	"S7" property for 'BIDS' classes
bids_property_tabular_content	"S7" property for 'BIDS' classes
bids_property_tabular_meta	"S7" property for 'BIDS' classes
bids_property_unnamed_list	"S7" property for 'BIDS' classes
bids_subject	'BIDS' subject class
download_bids_examples	Download 'BIDS' example data-sets
get_bids_dataset_description	Class definition of 'BIDS' data-set description
get_bids_entity	Get 'BIDS' entity values from file
get_bids_entity_rules	Get 'BIDS' entity values from file
get_bids_participants	'BIDS' participant table class
get_bids_phenotype_data	'BIDS' phenotype and assessment table class
get_bids_samples	'BIDS' samples table class
new_bids_class	Create new 'bidsr' class definition
new_bids_entity_file_class	Class generator for 'BIDS' file class with entities
new_bids_tabular_class	Class definitions and utilities for 'BIDS' tabular
parse_path_bids_entity	Parse 'BIDS' entities from file path
query_bids	Query 'BIDS'
resolve_bids_path	Resolve path of a 'BIDS' object
save_bids_tabular	Class definitions and utilities for 'BIDS' tabular
save_bids_tabular_default	Class definitions and utilities for 'BIDS' tabular