| binnest | Binary Random Effects Models with Two Levels of Nesting |
| biv.betab | Bivariate Beta-binomial Regression Models |
| biv.binom | Marginal Bivariate Binomial Regression Models |
| capture | Capture-recapture Models |
| catmiss | Marginal Probabilities for Categorical Repeated Measurements with Missing Data |
| chidden | Continuous-time Hidden Markov Chain Models |
| cphidden | Changepoint Location using a Continuous-time Two-state Hidden Markov Chain |
| deviance.gar | Generalized Autoregression Models |
| deviance.gausscop | Multivariate Gaussian Copula with Arbitrary Marginals |
| deviance.hnlm | Generalized Nonlinear Regression using h-likelihood for a Random Parameter |
| deviance.kalcount | Repeated Measurements Models for Counts with Frailty or Serial Dependence |
| deviance.kalseries | Repeated Measurements Models for Continuous Variables with Frailty or Serial Dependence |
| fitted.gar | Generalized Autoregression Models |
| fitted.gausscop | Multivariate Gaussian Copula with Arbitrary Marginals |
| fitted.hnlm | Generalized Nonlinear Regression using h-likelihood for a Random Parameter |
| fitted.kalcount | Repeated Measurements Models for Counts with Frailty or Serial Dependence |
| fitted.kalseries | Repeated Measurements Models for Continuous Variables with Frailty or Serial Dependence |
| gar | Generalized Autoregression Models |
| gausscop | Multivariate Gaussian Copula with Arbitrary Marginals |
| glmm | Generalized Linear Mixed Models |
| gnlmix | Generalized Nonlinear Regression with a Random Parameter |
| gnlmm | Generalized Nonlinear Mixed Models |
| gnlmm3 | Generalized Nonlinear Mixed Models for Three-parameter Distributions |
| hidden | Discrete-time Hidden Markov Chain Models |
| hnlmix | Generalized Nonlinear Regression using h-likelihood for a Random Parameter |
| kalcount | Repeated Measurements Models for Counts with Frailty or Serial Dependence |
| kalseries | Repeated Measurements Models for Continuous Variables with Frailty or Serial Dependence |
| marg.hom | Marginal Homogeneity Models |
| nbkal | Negative Binomial Models with Kalman Update |
| plot.hidden | Discrete-time Hidden Markov Chain Models |
| print.gar | Generalized Autoregression Models |
| print.gausscop | Multivariate Gaussian Copula with Arbitrary Marginals |
| print.hnlm | Generalized Nonlinear Regression using h-likelihood for a Random Parameter |
| print.kalcount | Repeated Measurements Models for Counts with Frailty or Serial Dependence |
| print.kalseries | Repeated Measurements Models for Continuous Variables with Frailty or Serial Dependence |
| print.marginal | Marginal Homogeneity Models |
| print.nbkal | Negative Binomial Models with Kalman Update |
| residuals.gar | Generalized Autoregression Models |
| residuals.gausscop | Multivariate Gaussian Copula with Arbitrary Marginals |
| residuals.hnlm | Generalized Nonlinear Regression using h-likelihood for a Random Parameter |
| residuals.kalcount | Repeated Measurements Models for Counts with Frailty or Serial Dependence |
| residuals.kalseries | Repeated Measurements Models for Continuous Variables with Frailty or Serial Dependence |
| setup | Capture-recapture Models |
| volatility | Generalized Autoregression Models |
| volatility.gar | Generalized Autoregression Models |