'lme4' for Genomic Selection

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Documentation for package ‘lme4GS’ version 0.1

• DESCRIPTION file.

Help Pages

lme4GS-package	lme4 for Genomic Selection
lme4GS	lme4 for Genomic Selection
lmerUvcov	Fits a linear mixed model with user specified variance covariance-matrices.
lmerUvcov-class	User defined variance covariance mixed-effects model fits
maize.G	Genomic relationship matrix for maize lines
maize.Pheno	Phenotypical data for the maize dataset
ranef-method	User defined variance covariance mixed-effects model fits
ranefUvcov	Extract the conditional means of the random effects
ranefUvcovNew	Obtain BLUPs for new levels of random effects with user specified variance covariance-matrices.
theta_optim	Selection of bandwidth parameter for Gaussian and exponential kernels.
wheat.Pedigree	Pedigree infomation for 599 wheat lines
wheat.Pheno	Phenotypical data for the wheat dataset
wheat.sets	Sets for cross validation (CV)
wheat.X	Molecular markers