| add_kegg | add_kegg |
| add_taxonomy | add_taxonomy |
| crumble_taxonomy | crumble_taxonomy |
| export_ipath3 | export_ipath3 |
| export_robject | export_robject |
| export_vennlists | export_vennlists |
| fecal_waters | fecal waters |
| filter_shared | filter_shared |
| filter_text | filter_text |
| filter_unshared | filter_unshared |
| getsc_specific | getsc_specific |
| identify_differences | identify_differences |
| inspect_sample_elements | inspect_sample_elements |
| load_protspeps | load_protspeps |
| plot_dendocluster | plot_dendocluster |
| plot_fulltaxo | plot_fulltaxo |
| plot_intensities | plot_intensities |
| plot_intensities_ratio | plot_intensities_ratio |
| plot_pca | plot_pca |
| plot_pietaxo | plot_pietaxo |
| plot_stackedtaxo | plot_stackedtaxo |
| plot_venn | plot_venn |
| remove_element | remove_element |
| select_element | select_element |
| species_annot_fw | species_annot_fw |
| species_fw | species_fw |
| venn_methods | venn methods |