Model-Based Estimation of Confounder-Adjusted Attributable Fractions

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Documentation for package ‘AF’ version 0.1.5

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AF.cc Attributable fraction for mached and non-matched case-control sampling designs. NOTE! Deprecated function. Use 'AFglm' (for unmatched case-control studies) or 'AFclogit' (for matched case-control studies).
AF.ch Attributable fraction function for cohort sampling designs with time-to-event outcomes. NOTE! Deprecated function. Use 'AFcoxph'.
AF.cs Attributable fraction for cross-sectional sampling designs. NOTE! Deprecated function. Use 'AFglm'.
AFclogit Attributable fraction estimation based on a conditional logistic regression model as a 'clogit' object (commonly used for matched case-control sampling designs).
AFcoxph Attributable fraction function based on a Cox Proportional Hazard regression model as a 'coxph' object (commonly used for cohort sampling designs with time-to-event outcomes).
AFglm Attributable fraction estimation based on a logistic regression model from a 'glm' object (commonly used for cross-sectional or case-control sampling designs).
AFivglm Attributable fraction function based on Instrumental Variables (IV) regression as an 'ivglm' object in the 'ivtools' package.
AFparfrailty Attributable fraction function based on a Weibull gamma-frailty model as a 'parfrailty' object (commonly used for cohort sampling family designs with time-to-event outcomes).
clslowbwt Birthweight data clustered on the mother.
plot.AF Plot function for objects of class "'AF'" from the function 'AFcoxph' or 'AFparfrailty'.
rott2 Cohort study on breast cancer patients from the Netherlands.
singapore Case-control study on oesophageal cancer in Chinese Singapore men.
summary.AF Summary function for objects of class "'AF'".