Transition Network Analysis (TNA)

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Documentation for package ‘tna’ version 0.4.0

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A B C D E F G H M P R S T

tna-package The 'tna' package.

-- A --

as.igraph.group_tna Coerce a specific group from a 'group_tna' object to an 'igraph' object.
as.igraph.matrix Coerce a weight matrix to an 'igraph' object.
as.igraph.tna Coerce a 'tna' object to an 'igraph' object.

-- B --

betweenness_network Build and Visualize a Network with Edge Betweenness
betweenness_network.tna Build and Visualize a Network with Edge Betweenness
bootstrap Bootstrap Transition Networks from Sequence Data
bootstrap.group_tna Bootstrap Transition Networks from Sequence Data
bootstrap.tna Bootstrap Transition Networks from Sequence Data
build_model Build a Transition Network Analysis Model
build_model.data.frame Build a Transition Network Analysis Model
build_model.default Build a Transition Network Analysis Model
build_model.matrix Build a Transition Network Analysis Model
build_model.stslist Build a Transition Network Analysis Model
build_model.tna_data Build a Transition Network Analysis Model

-- C --

centralities Calculate Centrality Measures for a Transition Matrix
centralities.group_tna Calculate Centrality Measures for a Transition Matrix
centralities.matrix Calculate Centrality Measures for a Transition Matrix
centralities.tna Calculate Centrality Measures for a Transition Matrix
cliques Identify Cliques in a Transition Network
cliques.group_tna Identify Cliques in a Transition Network
cliques.tna Identify Cliques in a Transition Network
communities Community Detection for Transition Networks
communities.group_tna Community Detection for Transition Networks
communities.tna Community Detection for Transition Networks
compare Compare Two Matrices or TNA Models with Comprehensive Metrics
compare.group_tna Compare TNA Clusters with Comprehensive Metrics
compare.matrix Compare Two Matrices or TNA Models with Comprehensive Metrics
compare.tna Compare Two Matrices or TNA Models with Comprehensive Metrics
ctna Build a Transition Network Analysis Model

-- D --

deprune Restore a Pruned Transition Network Analysis Model
deprune.group_tna Restore a Pruned Transition Network Analysis Model
deprune.tna Restore a Pruned Transition Network Analysis Model

-- E --

engagement Example data on student engagement
engagement_mmm Example mixed Markov model fitted to the 'engagement' data
estimate_centrality_stability Estimate Centrality Stability
estimate_centrality_stability.group_tna Estimate Centrality Stability
estimate_centrality_stability.tna Estimate Centrality Stability
estimate_cs Estimate Centrality Stability
estimate_cs.group_tna Estimate Centrality Stability
estimate_cs.tna Estimate Centrality Stability

-- F --

ftna Build a Transition Network Analysis Model

-- G --

group_ctna Build a grouped Transition Network Analysis Model
group_ftna Build a grouped Transition Network Analysis Model
group_model Build a grouped Transition Network Analysis Model
group_model.default Build a grouped Transition Network Analysis Model
group_model.mhmm Build a grouped Transition Network Analysis Model
group_regulation Example data on group regulation
group_tna Build a grouped Transition Network Analysis Model

-- H --

hist.group_tna Plot a Histogram of Edge Weights for a 'group_tna' Object.
hist.tna Plot a Histogram of Edge Weights in the Network

-- M --

mmm_stats Retrieve statistics from a mixture Markov model (MMM)

-- P --

permutation_test Compare Two Networks from Sequence Data Using Permutation Tests
plot.group_tna Plot a grouped Transition Network Analysis Model
plot.group_tna_centralities Plot Centrality Measures
plot.group_tna_cliques Plot Found Cliques
plot.group_tna_communities Plot Found Communities
plot.group_tna_stability Plot Centrality Stability Results
plot.tna Plot a Transition Network Analysis Model
plot.tna_centralities Plot Centrality Measures
plot.tna_cliques Plot Cliques of a TNA Network
plot.tna_communities Plot Communities
plot.tna_comparison Plot the results of comparing two 'tna' models or matrices
plot.tna_permutation Plot the Significant Differences from a Permutation Test
plot.tna_stability Plot Centrality Stability Results
plot_compare Plot the difference network between two models
plot_compare.group_tna Plot the difference network between two clusters
plot_compare.tna Plot the difference network between two models
plot_mosaic Create a mosaic plot of transitions
plot_mosaic.group_tna Plot state frequencies as a mosaic between two groups
plot_mosaic.tna Create a mosaic plot of transitions
plot_mosaic.tna_data Plot state frequencies as a mosaic between two groups
prepare_data Compute User Sessions from Event Data
print.group_tna Print a 'group_tna' Object
print.group_tna_bootstrap Print 'group_tna' Bootstrap Results
print.group_tna_centralities Print Centrality Measures
print.group_tna_cliques Print Found Cliques
print.group_tna_communities Print Detected Communities
print.group_tna_stability Print Centrality Stability Results
print.summary.group_tna Print the summary of a grouped Transition Network Analysis Model
print.summary.group_tna_bootstrap Print Bootstrap Summary for a Grouped Transition Network
print.summary.tna Print a TNA Summary
print.summary.tna_bootstrap Print Bootstrap Summary
print.tna Print a 'tna' object
print.tna_bootstrap Print Bootstrap Results
print.tna_centralities Print Centrality Measures
print.tna_cliques Print Found Cliques of a TNA Network
print.tna_communities Print Detected Communities
print.tna_comparison Print Comparison Results
print.tna_data Print a TNA data object
print.tna_permutation Print Permutation Test Results
print.tna_stability Print Centrality Stability Results
prune Prune a 'tna' network based on transition probabilities
prune.group_tna Prune a 'tna' network based on transition probabilities
prune.tna Prune a 'tna' network based on transition probabilities
pruning_details Print Detailed Information on the Pruning Results
pruning_details.group_tna Print Detailed Information on the Pruning Results
pruning_details.tna Print Detailed Information on the Pruning Results

-- R --

rename_groups Rename clusters
reprune Restore Previous Pruning of a Transition Network Analysis Model
reprune.group_tna Restore Previous Pruning of a Transition Network Analysis Model
reprune.tna Restore a Pruned Transition Network Analysis Model

-- S --

summary.group_tna Calculate Summary of Network Metrics for a grouped Transition Network
summary.group_tna_bootstrap Summarize Bootstrap Results for a Grouped Transition Network
summary.tna Calculate Summary of Network Metrics for a Transition Network
summary.tna_bootstrap Summarize Bootstrap Results

-- T --

tna Build a Transition Network Analysis Model