Compartmental Susceptible-Infectious-Recovered (SIR) Model of Community and Household Infection

Documentation for package ‘SIRmcmc’ version 1.1.1

community_attack_rate	Compute the community attack rate
hh.transmission	Simulated data under the SIR.
hh.transmission.epsilon	Simulated data under SIR, with covariates.
household_transmission	Estimate parameters from SIR model
MCMC_date	Convert dates to a list of extendend natural numbers.
prior	Compute prior probability of parameters
secondary_attack_rate	Compute the secondary attack rate
unifprior	A uniform prior on the model parameters