Classification and Clustering of Sequencing Data Based on a Poisson Model

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Documentation for package ‘PoiClaClu’ version 1.0.2.1

• DESCRIPTION file.

Help Pages

PoiClaClu-package	Classification and clustering of RNA sequencing data using a Poisson model
Classify	Classify observations using a Poisson model.
Classify.cv	Function to do cross-validation for Poisson classification.
ColorDendrogram	Color the leaves in a hierarchical clustering dendrogram
CountDataSet	Generate a simulated sequencing data set using a negative binomial model.
FindBestTransform	Find the power transformation that makes a data set approximately Poisson.
PoiClaClu	Classification and clustering of RNA sequencing data using a Poisson model
PoissonDistance	Given a n-by-p data matrix, compute the corresponding n-by-n Poisson dissimilarity matrix.