Phylogenetic Comparative Tools for Missing Data and
Within-Species Variation
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Documentation for package ‘Rphylopars’ version 0.3.10
Help Pages
| Rphylopars-package | Phylogenetic Comparative Tools for Missing Data and Within-Species Variation |
| anc.recon | Ultra-fast maximum likelihood ancestral state reconstruction |
| anova.phylopars.lm | Phylopars regression ANOVA |
| fast.SSC | Fast Phylogenetic Signal Using Sum of Squared Changes (SSC) |
| logLik.phylopars | Extract Log_likelihood |
| logLik.phylopars.lm | Extract Log_likelihood |
| phylopars | Estimation of phylogenetic and phenotypic covariance parameters |
| phylopars.lm | Rphylopars regression |
| print.phylopars | Print phylopars |
| print.phylopars.lm | Print phylopars.lm |
| print.SSC | Print SSC |
| simtraits | Simulate traits for phylopars estimation |
| summary.phylopars | Phylopars summary |
| summary.phylopars.lm | phylopars.lm summary |
| write.phylopars | Write data and tree files for Python phylopars compatability. |