A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis

Documentation for package ‘WGScan’ version 0.1

WGScan.example	Data example for WGScan (A Genome-Wide Scan Statistic Framework For Whole-Genome Sequence Data Analysis)
WGScan.info	hg19 chromosome sizes
WGScan.prelim	The preliminary data management for WGScan
WGScan.Region	Scan the association between an quantitative/dichotomous outcome variable and a region by score type statistics allowing for multiple functional annotation scores.
WGScan.SingleWindow	Test the association between an quantitative/dichotomous outcome variable and a single window by dispersion or burden test allowing for multiple functional annotation scores.
WGScan.VCF.chr	Scan a VCF file to study the association between an quantitative/dichotomous outcome variable and a region or whole chromosome by score type statistics allowing for multiple functional annotation scores.