Methods for Analysing Forensic Ancestry Informative Markers
![[R logo]](../../../doc/html/Rlogo.svg)
![[Up]](../../../doc/html/left.jpg)
![[Top]](../../../doc/html/up.jpg)
Documentation for package ‘genogeographer’ version 0.1.19
Help Pages
| genogeographer-package | genogeographer: Methods for analysing forensic Ancestry Informative Markers |
| app_genogeo | Shiny application for GenoGeoGrapher |
| bar_colour | bar_colour |
| error_bar_plot | Plot log likelihoods of profiles with approximate confidence intervals |
| exponent_tilt | P-values from Importing Sampling using Exponential tilting |
| genogeo | Likelihood ratio tests for AIMs |
| genogeographer | genogeographer: Methods for analysing forensic Ancestry Informative Markers |
| kidd_loci | Kenn Kidd Lab markers |
| LR_table | Compute pairwise likelihood ratios |
| main_alleles | AIMs markers in Precision ID Ancestry Panel (Thermo Fisher Scientific) |
| map_plot | Plot LTR z-scores on map |
| pops_to_DB | Pre-compute the scores for a given reference database |
| profile_AA_x0 | Function that compute the genotype probability for each population (rows in df) |
| profile_admixture | Compute the z-score (and more) for admixed hypotheses |
| random_AIMs_profile | Simulate a random AIMs profile |
| seldin_loci | Seldin Lab markers |
| simulate_pops | Simulate random populations |