Last updated on 2025-05-23 04:51:07 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.0 | 7.63 | 107.44 | 115.07 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.5.0 | 5.47 | 70.62 | 76.09 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.5.0 | 149.46 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.5.0 | 168.76 | OK | |||
| r-devel-windows-x86_64 | 0.5.0 | 12.00 | 114.00 | 126.00 | OK | |
| r-patched-linux-x86_64 | 0.5.0 | 7.95 | 100.69 | 108.64 | OK | |
| r-release-linux-x86_64 | 0.5.0 | 6.89 | 99.49 | 106.38 | OK | |
| r-release-macos-arm64 | 0.5.0 | 93.00 | OK | |||
| r-release-macos-x86_64 | 0.5.0 | 169.00 | OK | |||
| r-release-windows-x86_64 | 0.5.0 | 12.00 | 115.00 | 127.00 | OK | |
| r-oldrel-macos-arm64 | 0.5.0 | 107.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.5.0 | 146.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.5.0 | 13.00 | 144.00 | 157.00 | OK |
Version: 0.5.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [48s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(ebvcube)
ebvcube 0.5.0
>
> test_check("ebvcube")
[ FAIL 34 | WARN 0 | SKIP 0 | PASS 123 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-analyse.R:22:3'): test ebv_analyse bb ──────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_analyse(...) at test-analyse.R:22:3
2. │ └─ebvcube::ebv_read_bb(...)
3. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
4. └─base::loadNamespace(x)
5. └─base::library.dynam(lib, package, package.lib)
6. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-analyse.R:41:3'): test ebv_analyse shp ─────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_analyse(...) at test-analyse.R:41:3
2. │ └─ebvcube::ebv_read_shp(...)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv-read.R:4:3'): test ebv_read single timestep ────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read(...) at test-ebv-read.R:4:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv-read.R:11:3'): test ebv_read multiple timestep ─────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read(...) at test-ebv-read.R:11:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv-read.R:18:3'): test ebv_read ISO date + metric&scenario ────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read(...) at test-ebv-read.R:18:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv-read.R:26:3'): test ebv_read_bb single timestep ────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read_bb(...) at test-ebv-read.R:26:3
2. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv-read.R:34:3'): test ebv_read_bb multiple timesteps ─────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read_bb(...) at test-ebv-read.R:34:3
2. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv-read.R:42:3'): test ebv_read_bb ISO date + metric&scenario ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read_bb(...) at test-ebv-read.R:42:3
2. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv-read.R:51:3'): test ebv_read_shp single timestep ───────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read_shp(...) at test-ebv-read.R:51:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv-read.R:62:3'): test ebv_read_shp multiple timesteps ────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read_shp(...) at test-ebv-read.R:62:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv-read.R:73:3'): test ebv_read_shp ISO date + metric&scenario ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read_shp(...) at test-ebv-read.R:73:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_create_taxonomy.R:19:3'): test ebv_create_taxonomy no lsid ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ebv_create_taxonomy.R:19:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─ebvcube::ebv_create_taxonomy(...)
10. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
11. └─base::loadNamespace(x)
12. └─base::library.dynam(lib, package, package.lib)
13. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_create_taxonomy.R:90:3'): test ebv_create_taxonomy with lsid ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ebv_create_taxonomy.R:90:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─ebvcube::ebv_create_taxonomy(...)
10. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
11. └─base::loadNamespace(x)
12. └─base::library.dynam(lib, package, package.lib)
13. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_manipulate.R:19:3'): test ebv_create, ebv_add_data and ebv_attribute ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ebv_manipulate.R:19:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─ebvcube::ebv_create(...)
10. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
11. └─base::loadNamespace(x)
12. └─base::library.dynam(lib, package, package.lib)
13. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_metadata.R:44:3'): test ebv_metadata scenario&metric only mandatory ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ebv_metadata.R:44:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─ebvcube::ebv_create(...)
10. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
11. └─base::loadNamespace(x)
12. └─base::library.dynam(lib, package, package.lib)
13. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_metadata.R:105:3'): test ebv_metadata metric only mandatory ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ebv_metadata.R:105:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─ebvcube::ebv_create(...)
10. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
11. └─base::loadNamespace(x)
12. └─base::library.dynam(lib, package, package.lib)
13. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_metadata.R:183:3'): test ebv_metadata scenario&metric with optional args ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-ebv_metadata.R:183:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─ebvcube::ebv_create(...)
10. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
11. └─base::loadNamespace(x)
12. └─base::library.dynam(lib, package, package.lib)
13. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_utils.R:16:3'): test ebv_i_eval_epsg 4326 ──────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube:::ebv_i_eval_epsg(4326) at test-ebv_utils.R:16:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_utils.R:21:3'): test ebv_i_eval_epsg ESRI:54009 ────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube:::ebv_i_eval_epsg("ESRI:54009") at test-ebv_utils.R:21:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_utils.R:26:3'): test ebv_i_eval_epsg 4326 return proj ──────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube:::ebv_i_eval_epsg(4326, T) at test-ebv_utils.R:26:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_utils.R:31:3'): test ebv_i_eval_epsg ESRI:54009 return proj ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube:::ebv_i_eval_epsg("ESRI:54009", T) at test-ebv_utils.R:31:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_utils.R:36:3'): test ebv_i_eval_epsg wrong EPSG code ───────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─testthat::expect_error(ebv_i_eval_epsg(1234), "The EPSG you provided cannot be found.") at test-ebv_utils.R:36:3
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─ebvcube:::ebv_i_eval_epsg(1234)
8. └─base::loadNamespace(x)
9. └─base::library.dynam(lib, package, package.lib)
10. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-ebv_utils.R:101:3'): test ebv_i_transform_bb ───────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube:::ebv_i_transform_bb(c(-50, 50, 20, 40), 4326, 3857) at test-ebv_utils.R:101:3
2. │ └─ebvcube:::ebv_i_eval_epsg(src_epsg)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-plots.R:15:3'): test ebv_trend mean shp ────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_trend(...) at test-plots.R:15:3
2. │ └─ebvcube::ebv_read_shp(...)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-plots.R:69:3'): test ebv_map 1 ─────────────────────────────────
<vctrs_error_scalar_type/vctrs_error/rlang_error/error/condition>
Error in `stringr::str_detect(cond, "memory")`: `string` must be a vector, not a <simpleError/error/condition> object.
Backtrace:
▆
1. ├─ebvcube::ebv_map(...) at test-plots.R:69:3
2. │ └─base::tryCatch(...)
3. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. │ └─value[[3L]](cond)
6. │ └─stringr::str_detect(cond, "memory")
7. │ └─stringr:::check_lengths(string, pattern)
8. │ └─vctrs::vec_size_common(...)
9. └─vctrs:::stop_scalar_type(`<fn>`(`<smplErrr>`), "string", `<env>`)
10. └─vctrs:::stop_vctrs(...)
11. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call)
── Error ('test-plots.R:82:3'): test ebv_map: col_rev ──────────────────────────
<vctrs_error_scalar_type/vctrs_error/rlang_error/error/condition>
Error in `stringr::str_detect(cond, "memory")`: `string` must be a vector, not a <simpleError/error/condition> object.
Backtrace:
▆
1. ├─ebvcube::ebv_map(...) at test-plots.R:82:3
2. │ └─base::tryCatch(...)
3. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. │ └─value[[3L]](cond)
6. │ └─stringr::str_detect(cond, "memory")
7. │ └─stringr:::check_lengths(string, pattern)
8. │ └─vctrs::vec_size_common(...)
9. └─vctrs:::stop_scalar_type(`<fn>`(`<smplErrr>`), "string", `<env>`)
10. └─vctrs:::stop_vctrs(...)
11. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call)
── Error ('test-plots.R:97:3'): test ebv_map: no countries, one class only ─────
<vctrs_error_scalar_type/vctrs_error/rlang_error/error/condition>
Error in `stringr::str_detect(cond, "memory")`: `string` must be a vector, not a <simpleError/error/condition> object.
Backtrace:
▆
1. ├─ebvcube::ebv_map(...) at test-plots.R:97:3
2. │ └─base::tryCatch(...)
3. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. │ └─value[[3L]](cond)
6. │ └─stringr::str_detect(cond, "memory")
7. │ └─stringr:::check_lengths(string, pattern)
8. │ └─vctrs::vec_size_common(...)
9. └─vctrs:::stop_scalar_type(`<fn>`(`<smplErrr>`), "string", `<env>`)
10. └─vctrs:::stop_vctrs(...)
11. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call)
── Error ('test-resample.R:4:3'): test ebv_resample single timestep, given resolution ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_resample(...) at test-resample.R:4:3
2. │ └─ebvcube:::ebv_i_eval_epsg(epsg_dest)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-resample.R:15:3'): test ebv_resample multiple timesteps, given resolution, metric ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_resample(...) at test-resample.R:15:3
2. │ └─ebvcube:::ebv_i_eval_epsg(epsg_dest)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-resample.R:27:3'): test ebv_resample single timestep, given second netCDF ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_resample(...) at test-resample.R:27:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-write.R:4:3'): test ebv_write bb ───────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read_bb(...) at test-write.R:4:3
2. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-write.R:14:3'): test ebv_write shp ─────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read_shp(...) at test-write.R:14:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-write.R:25:3'): test ebv_write ─────────────────────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_read(...) at test-write.R:25:3
2. └─base::loadNamespace(x)
3. └─base::library.dynam(lib, package, package.lib)
4. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test-write.R:61:3'): test ebv_write and ebv_read DelayedMatrix Array ──
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/data/gannet/ripley/R/test-clang/terra/libs/terra.so':
libhdf5.so.200: cannot open shared object file: No such file or directory
Backtrace:
▆
1. ├─ebvcube::ebv_write(...) at test-write.R:61:3
2. │ └─ebvcube:::ebv_i_eval_epsg(epsg)
3. └─base::loadNamespace(x)
4. └─base::library.dynam(lib, package, package.lib)
5. └─base::dyn.load(file, DLLpath = DLLpath, ...)
[ FAIL 34 | WARN 0 | SKIP 0 | PASS 123 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang