Last updated on 2025-07-17 04:54:44 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.82 | 256.19 | 269.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.93 | 206.19 | 217.12 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.61 | 277.85 | 291.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 177.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 182.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 161.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.466, system: 0.038, elapsed: 1.672 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.879, system: 0.099, elapsed: 11.161 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.681, system: 0.186, elapsed: 5.154 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.177 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.908, system: 0.359, elapsed: 19.112 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.468, system: 0.035, elapsed: 1.965 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.012, system: 0.105, elapsed: 12.376 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.249 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.689, system: 0.157, elapsed: 6.128 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.288 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.055, system: 0.331, elapsed: 21.823 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.549, system: 0.034, elapsed: 2.737 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.942, system: 0.064, elapsed: 15.687 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.010, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.674, system: 0.172, elapsed: 6.390 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.004, elapsed: 0.259 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.118, system: 0.205, elapsed: 1.258 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.259, system: 0.510, elapsed: 27.857 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.031, elapsed: 2.748 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.946, system: 0.066, elapsed: 14.410 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.200 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.691, system: 0.169, elapsed: 5.136 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.257 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.109, system: 0.445, elapsed: 19.739 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.258, system: 0.756, elapsed: 43.567 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/104s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.557, system: 0.045, elapsed: 1.830 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.980, system: 0.108, elapsed: 10.611 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.014, elapsed: 0.209 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.351, system: 0.170, elapsed: 3.834 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.004, elapsed: 0.244 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.752, system: 0.360, elapsed: 17.346 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.477, system: 0.031, elapsed: 1.695 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.100, system: 0.085, elapsed: 15.056 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.615, system: 0.158, elapsed: 6.168 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.208 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.080, system: 0.315, elapsed: 24.321 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.502, system: 0.032, elapsed: 1.878 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.930, system: 0.064, elapsed: 14.285 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.010, elapsed: 0.273 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.522, system: 0.156, elapsed: 5.540 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.251 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.102, system: 0.218, elapsed: 1.014 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.032, system: 0.517, elapsed: 24.175 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.029, elapsed: 2.020 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.920, system: 0.049, elapsed: 11.528 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.011, elapsed: 0.263 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.539, system: 0.161, elapsed: 4.949 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.224 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.956, system: 0.422, elapsed: 11.864 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.880, system: 0.704, elapsed: 31.769 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64