Last updated on 2025-10-29 03:52:00 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.26 | 260.99 | 274.25 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.50 | 245.74 | 255.24 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.00 | 274.06 | 289.06 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.93 | 258.75 | 273.68 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 22.00 | 301.00 | 323.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 20.00 | 290.00 | 310.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [94s/220s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.886, system: 0.122, elapsed: 4.836 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.160, system: 0.478, elapsed: 23.718 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.026, elapsed: 0.582 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.265, system: 0.353, elapsed: 10.049 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.010, elapsed: 0.426 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.297, system: 1.044, elapsed: 40.879 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.753, system: 0.096, elapsed: 3.615 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.253, system: 0.514, elapsed: 23.158 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.031, elapsed: 0.571 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.599, system: 0.542, elapsed: 11.868 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.016, elapsed: 0.521 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.595, system: 1.297, elapsed: 41.267 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.881, system: 0.099, elapsed: 5.492 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.894, system: 0.271, elapsed: 29.501 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.027, elapsed: 0.379 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.430, system: 0.400, elapsed: 11.335 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.008, elapsed: 0.359 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.375, system: 0.417, elapsed: 2.205 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.689, system: 1.305, elapsed: 50.846 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.619, system: 0.054, elapsed: 3.115 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.019, system: 0.283, elapsed: 25.884 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.021, elapsed: 0.462 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.304, system: 0.319, elapsed: 10.557 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.007, elapsed: 0.503 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.734, system: 0.918, elapsed: 29.729 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.791, system: 1.671, elapsed: 71.892 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [93s/210s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.068, system: 0.176, elapsed: 6.946 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.174, system: 0.508, elapsed: 21.158 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.027, elapsed: 0.433 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.301, system: 0.533, elapsed: 10.159 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.016, elapsed: 0.282 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.561, system: 1.407, elapsed: 40.713 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.976, system: 0.119, elapsed: 5.906 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.190, system: 0.465, elapsed: 29.210 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.026, elapsed: 0.585 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.213, system: 0.315, elapsed: 9.584 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.009, elapsed: 0.424 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.383, system: 1.013, elapsed: 46.923 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.743, system: 0.059, elapsed: 3.281 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.038, system: 0.302, elapsed: 26.133 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.026, elapsed: 0.464 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.110, system: 0.372, elapsed: 8.909 seconds]
Computing values for grid cells...
... done. [user: 0.202, system: 0.027, elapsed: 0.456 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.244, system: 0.329, elapsed: 1.948 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.264, system: 1.281, elapsed: 43.082 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.693, system: 0.055, elapsed: 3.733 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.955, system: 0.274, elapsed: 23.094 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.025, elapsed: 0.676 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.117, system: 0.353, elapsed: 10.592 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.007, elapsed: 0.383 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.477, system: 0.832, elapsed: 25.685 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.357, system: 1.652, elapsed: 66.020 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64