netcutter development
version
netcutter v0.3.1
- Use
rlecuyer package to generate random numbers (avoids
polluting the global environment)
- Fix automatic url in DESCRIPTION
- Use TRUE/FALSE instead of T/F
netcutter v0.3.0
- Introduce the
terms_of_interest argument of
nc_eval().
- Realize that the C++ speedup only worked for small-size
matrices
- Devise algorithm that scales as (N + M) rather than (N * M),
consequently drop Rcpp
netcutter v0.2.1
- Rewrite the edge-swapping algorithm in C++ (it’s now 20 times
faster).
- Use combn() instead of expand.grid() in the internal function
nc_define_modules().
As of today, the C++ version uses the old “Rounding” random sampler
that R has used before version 3.6 (see
here). This sampler is biased if the population size is large (some
ppl say >1e7). Use v0.2.0 if you are concerned.
netcutter v0.2.0
- Fix p-values calculation: provide
Pr(==k) and
Pr(>=k).
- Add a
mc.cores option to nc_eval()
The p-values calculation in previous releases was completely wrong:
do not use releases older than v0.2.0!
netcutter v0.1.1
- Fix bug occurring when setting R to 1 (#1)
- Make nc_randomise() about two times faster
- Add a
verbose option to nc_occ_probs()
netcutter v0.1.0